Publications

2011

Cohen SA, Naumova EN. Age-Adjustment in National Biosurveillance Systems. Infectious Disease Informatics. 2011 – Springer

Feffeman NH, Naumova EN. Innovation in observation: a vision for early outbreak detection. Emerging Health Threats Journal, 2011 - eht-journal.net

Allison GM, Rogers KA, Borad A, Ahmed S, Karim MM, Kane AV, Hibberd PL, Naumova EN, Calderwood SB, Ryan ET, Khan WA, Ward HD. Antibody responses to the immunodominant Cryptosporidium gp15 antigen and gp15 polymorphisms in a case-control study of cryptosporidiosis in children in Bangladesh. Am J Trop Med Hyg. 2011 Jul;85(1):97-104.

Chui KK, Jagai J, Griffiths J, Naumova E. Hospitalization of the Elderly in the United States for Nonspecific Gastrointestinal Diseases: A Search for Etiological Clues. Am J Public Health. 2011 Jun 8. [Epub ahead of print]

Chui KK, Cohen SA, Naumova EN.  Snowbirds and infection--new phenomena in pneumonia and influenza hospitalizations from winter migration of older adults: a spatiotemporal analysis. BMC Public Health. 2011 Jun 7;11:444.

Petrova GV, Naumova EN, Gorski J. The Polyclonal CD8 T Cell Response to Influenza M158-66 Generates a Fully Connected Network of Cross-Reactive Clonotypes to Structurally Related Peptides: A Paradigm for Memory Repertoire Coverage of Novel Epitopes or Escape Mutants. J Immunol. 2011 Apr 25. [Epub ahead of print]

Naumov YN, Naumova EN, Yassai MB, Gorski J. Selective T Cell Expansion during Aging of CD8 Memory Repertoires to Influenza Revealed by Modeling. J Immunol. 2011 Apr 22. [Epub ahead of print]

Naumova EN. Visual analytics for immunologists: Data compression and fractal distributions. Self Nonself. 2010 Jul;1(3):241-249. Epub 2010 Jun 30.

Chui KKH, Wenger JB, Cohen SA, Naumova EN. Visual Analytics for Epidemiologists: Understanding the Interactions Between Age, Time, and Disease with Multi-Panel Graphs. PLoS ONE. 2011. 6(2): e14683. doi:10.1371/journal.pone.0014683

Cohen SA, Chui KKH, Naumova EN. Measuring disease burden in the older population using the slope-intercept method for population log-linear estimation (SIMPLE). Statistics in Medicine. 2011. Feb 28;30(5):480-8. doi: 10.1002/sim.3886. Epub 2011 Feb 2.   

Cohen SA, Chui KK, Naumova EN. Influenza vaccination in young children reduces influenza-associated hospitalizations in older adults, 2002-2006. J Am Geriatr Soc. 2011 Feb;59(2):327-32. doi: 10.1111/j.1532-5415.2010.03271.x. Epub 2011 Jan 28.

2010

Naumova EN. Visual analytics for immunologists: Data compression and fractal distributions. Self Nonself. 2010 Jul;1(3):241-249. Epub 2010 Jun 30.

Mor SM, Aminawung JA, Demaria A, Naumova EN. Pneumonia and influenza hospitalization in HIV-positive seniors. Epidemiol Infect. 2010 Nov 26:1-9. [Epub ahead of print]

Lofgren ET, Wenger JB, Fefferman NH, Bina D, Gradus S, Bhattacharyya S, Naumov YN, Gorski J, Naumova EN. Disproportional effects in populations of concern for pandemic influenza: insights from seasonal epidemics in Wisconsin, 1967-2004. Influenza Other Respi Viruses. 2010 Jul;4(4):205-12.

Economos CD, Hennessy E, Sacheck JM, Shea MK, Naumova EN. Development and testing of the BONES physical activity survey for young children. BMC Musculoskelet Disord. 2010 Aug 31;11:195.

Egorov AI, Sempértegui F, Estrella B, Egas J, Naumova EN, Griffiths JK. The effect of Helicobacter pylori infection on growth velocity in young children from poor urban communities in Ecuador. Int J Infect Dis. 2010 Sep;14(9):e788-91. Epub 2010 Jul 17.

Cohen SA, Klassen AC, Ahmed S, Agree EM, Louis TA, Naumova EN. Trends for influenza and pneumonia hospitalization in the older population: age, period, and cohort effects. Epidemiol Infect. 2010 Jan 8:1-11. [Epub ahead of print]   

Egorov AI, Montuori Trimble LM, Ascolillo L, Ward HD, Levy DA, Morris RD, Naumova EN, Griffiths JK. Recent diarrhea is associated with elevated salivary IgG responses to Cryptosporidium in residents of an eastern Massachusetts community. Infection. 2010 Apr;38(2):117-23. Epub 2010 Mar 26.

Jagai JS, Griffiths JK, Kirshen PH, Webb P, Naumova EN. Patterns of Protozoan Infections: Spatiotemporal Associations with Cattle Density. Ecohealth. 2010 Mar 13. [Epub ahead of print]

Rioux CL, Tucker KL, Mwamburi M, Gute DM, Cohen SA, Brugge D. Residential traffic exposure, pulse pressure and C-reactive protein: Consistency and contrast among exposure characterization methods. Environmental Health Perspectives (2010). E-published ahead of print.   

Mor SM, Tumwine JK, Ndeezi G, Srinivasan MG, Kaddu-Mulindwa DH, Tzipori S, Griffiths JK. Respiratory cryptosporidiosis in HIV-seronegative children, Uganda: potential for respiratory transmission. Clin Infect Dis. 2010;50(10):1366-72.    

Wenger JB, Naumova EN. Seasonal synchronization of influenza in the United States older adult population. PLoS One. 2010 Apr 15;5(4):e10187.

2009

Castronovo DA, Chui KK, Naumova EN. Dynamic maps: a visual-analytic methodology for exploring spatio-temporal disease patterns. Environ Health. 2009 Dec 30;8:61.   

Chui KK, Webb P, Russell RM, Naumova EN. Geographic variations and temporal trends of Salmonella-associated hospitalization in the U.S. elderly, 1991-2004: a time series analysis of the impact of HACCP regulation. BMC Public Health. 2009 Dec 3;9:447.   

Cohen, SA. A review of demographic and infrastructural factors and potential solutions to the physician and nursing shortage predicted to impact the growing US elderly population. Journal of Public Health Management and Practice. 2009; 15(4):352-62.   

Cohen SA, Agree EM, Ahmed S, Naumova EN. Grandparental caregiving, income inequality, and respiratory infections in US seniors. Journal of Epidemiology and Community Health (2009), Epublished ahead of print.   

Jagai J, Naumova E. Clostridium difficile-associated disease in the elderly, United States. Emerg Infect Dis. 2009; 15:343-44.   

Jagai JS, Castronovo DA, Monchak J, Naumova EN. Seasonality of cryptosporidiosis: A meta-analysis approach. Environ Res. 2009; 109:465-78.   

Muchiri JM, Ascolillo L, Mugambi M, Mutwiri T, Ward HD, Naumova EN, Egorov AI, Cohen S, Else JG, Griffiths JK. Seasonality of Cryptosporidium oocyst detection in surface waters of Meru, Kenya as determined by two isolation methods followed by PCR. J Water Health. 2009;7(1):67-75.

Mor SM, DeMaria A, Jr., Griffiths JK, Naumova EN. Cryptosporidiosis in the elderly population of the United States. Clin Infect Dis. 2009; 48:698-705.

Mor SM, Tumwine JK, Naumova EN, Ndeezi G, Tzipori S. Microsporidiosis and malnutrition in children with persistent diarrhea, Uganda. Emerg Infect Dis. 2009; 15:49-52.   

Mor SM, Tzipori S. Cryptosporidiosis in children in Sub-Saharan Africa: a lingering challenge. Clin Infect Dis. 2008 Oct 1; 47(7):915-21    

Naumova EN, Gorski J, Naumov YN. Two Compensatory Pathways Maintain Long-Term Stability and Diversity in CD8 T Cell Memory Repertoires. J Immunol. 2009.   

Naumova EN, Parisi SM, Castronovo D, Pandita M, Wenger J, Minihan P. Pneumonia and influenza hospitalizations in elderly people with dementia. J Am Geriatr Soc. 2009 Dec;57(12):2192-9. Epub 2009 Oct 26.

Fefferman NH, Traniello JFA. Social Insects as Models in Epidemiology: Establishing the Foundation for an Interdisciplinary Approach to Disease and Sociality. In Organization of Insect Societies: From Genome to Sociocomplexity eds J. Gadau and J. Fewell. Harvard University Press. 2009.

Yassai MB, Naumov YN, Naumova EN, Gorski J. A clonotype nomenclature for T cell receptors. Immunogenetics. 2009; 61:493-502.

2008

Brachtl MV, Durant JL, Perez CP, Oviedo J, Sempertegui F, Naumova EN, Griffiths JK. Spatial and temporal variations and mobile source emissions of polycyclic aromatic hydrocarbons in Quito, Ecuador. Environ Pollut. 2009 Feb;157(2):528-36. Epub 2008 Nov 11.   

Cohen SA, Egorov AI, Jagai JS, Matyas BT, DeMaria A Jr, Chui KK, Griffiths JK, Naumova EN. The SEEDs of two gastrointestinal diseases: socioeconomic, environmental, and demographic factors related to cryptosporidiosis and giardiasis in Massachusetts. Environ Res. 2008 Oct;108(2):185-91.   

Naumov YN, Naumova EN, Yassai MB, Kota K, Welsh RM, Selin LK. Multiple glycines in TCR alpha-chains determine clonally diverse nature of human T cell memory to influenza A virus. J Immunol. 2008 Nov 15;181(10):7407-19.    

Naumova EN, Cohen SA. Commentary: population-level risk factors, population health, and health policy. J Public Health Policy. 2008 Sep;29(3):290-8.  

Naumova EN, Gorski J, Naumov YN. 2008: Simulation studies for a multistage dynamic process of immune memory response to influenza: experiment in silico. Ann. Zool. Fennici. 2008, 45:369-84.

Naumova EN, MacNeill IB. Time-distributed effect of exposure and infectious outbreaks. Environmetrics. Published Online: 2 Jun 2008.   

O'Neil EA, Naumova EN. Defining outbreak: breaking out of confusion. J Public Health Policy. 2007 Dec;28(4):442-55.